| ZKO number |
ZKO1057 |
| Recent progress of this line |
F1 individuals have been identified
|
|
Gene name |
elmod2
|
|
Ensembl ID |
ENSDARG00000052370
|
|
Zebrafish strain |
AB
|
|
Cas9 target site 1 sequence |
sense strand
GAAACACACAGACGCAGCC
|
|
Cas9 target site 2 sequence |
|
|
Position in the gene |
Exon 7
|
|
Restriction enzyme (RE) |
Hga1 (GACGC R︱R)
|
|
PCR primer (forward) |
TCCCCATTCGACTGTCTAGGT
|
|
PCR primer (reverse) |
TGTTGTTTGAGTGAACCTCACA
|
|
Length of expected PCR product (bp)
|
613
|
|
Length of expected RE digestion product (bp) |
225+388
|
|
Plasmids used for making Cas9 mRNA |
pXT7-hCAS9
|
| Plasmids?used?for?making?gRNA |
pMD19T-gRNA
|
| Primers?used?for?making?gRNA |
Pr-ZKO 1057
|
|
Dosage of injected Cas9 mRNA (ng/ul)
|
300
|
|
Dosage of injected gRNA (ng/ul)
|
50
|
|
Survival rate of F0 embryo @ 1dpf (%)
|
91.6
|
|
Method to estimate mutation efficiency |
Restriction enzyme digestionHga1
|
|
Stage of the embryos collected for mutation detection |
http://www.zfish.cn/upload/file/ZKOPDF/ZKO1057.pdf
|
|
Mutation efficiency in F0 embryos (%)
|
20
|
Picture?from?F0?embryos
? (gel?picture?or?sequencing?picture) |
|
|
Mutation type
|
Indel
|
|
Germline transmission efficiency in adult F0
|
25% (8/32)
|
|
Wild-type (WT) sequence
|
GAAACACACAGACGCAGCCCGGCAGGTTC
|
Germline mutations in selected F0
(By screening F1 embryos) |
F0-1 |
GAAACACACAGACG-------GCAGGTTC (-7bp)
GAAACACACAGACGCAG--------GTTC (-8bp)
|
|
F0-2
|
GAAACACACAGACG-----CGGCAGGTTC (-5bp)
GAAACACACAGACGCAAGCCCGCGGGGTTC (+1bp)
|
Mosaicism in selected F0
(By screening F1 adults) |
F0-1
|
GAAACACACAGACG-------GCAGGTTC (-7bp)
|
|
F0-2
|
GAAACACACAGACGCAG--------GTTC (-8bp)
|
|
Allele name and predicted product
|
1057a
1057b |
GAAACACACAGACG-------GCAGGTTC;(-7bp) ; Truncated protein (232 aa)
|
| GAAACACACAGACGCAG--------GTTC;(-8bp) ; Truncated protein (250 aa) |
|
突变创建时间 |
2014-01-14
|
|
填表时间 |
2014/1/4
|
|
修改时间 |
2016/11/11
|
|
PI/负责人 (工作单位) |
|
